Integrative Studies on the Morphology, Morphogenesis and Molecular Phylogeny of a Soil Ciliate, Parakahliella macrostoma (Foissner, 1982) Berger et al., 1985 (Ciliophora, Hypotrichia)
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Acta Protozoologica, 2018, Volume 57, Issue 2, pp. 107 - 122
https://doi.org/10.4467/16890027AP.18.010.8984Authors
The morphology and morphogenesis of two populations of the soil hypotrichous ciliate, Parakahliella macrostoma (Foissner, 1982) Berger et al. 1985, isolated from northwest China, were investigated based on specimens examined in vivo and stained with protargol. Our populations resemble the original one in terms of their live characters and cirral pattern. The main events during binary fission are as follows: (1) the parental adoral zone of membranelles is retained completely by the proter; (2) both in the proter and in the opisthe five frontal-ventral cirral anlagen are recognizable; (3) the marginal rows and dorsal kineties develop intrakinetally. In addition, the SSU rRNA gene was sequenced for the genus Parakahliella for the first time. Molecular phylogenetic analyses suggest that two populations of the genus Parakahliella cluster together and have a close relationship with species of Oxytrichidae.
Berger H. (1999) Monograph of the Oxytrichidae (Ciliophora, Hypotrichia). Monogr. Biol. 78: 1–1080
Berger H. (2006) Monograph of the Urostyloidea (Ciliophora, Hypotricha). Monogr. Biol. 85: 1–1303
Berger H. (2008) Monograph of the Amphisiellidae and Trachelostylidae (Ciliophora, Hypotricha). Monogr. Biol. 88: 1–737
Berger H. (2011) Monograph of the Gonostomatidae and Kahliellidae (Ciliophora, Hypotricha). Monogr. Biol. 90: 1–741
Berger H., Foissner W., Adam H. (1985) Morphological variation and comparative analysis of morphogenesis in Parakahliella macrostoma (Foissner, 1982) nov. gen. and Histriculus muscorum(Kahl, 1932), (Ciliophora, Hypotrichida). Protistologica 21: 295–311
Chen L. Y., Zhao X., Shao C., Miao M., Clamp J. (2017a) Morphology and phylogeny of two new ciliates, Sterkiella sinica sp. nov. and Rubrioxytricha tsinlingensis sp. nov. (Protozoa, Ciliophora, Hypotrichia) from north-west China. Syst. Biodivers. 15: 131–142
Chen X. M., Lu X. T., Luo X. T., Jiang J, Shao C., Al-Rasheid K. A. S., Warren A., Song W. B. (2017b) The diverse morphogenetic patterns in spirotrichs and philasterids: Researches based on five-year-projects supported by IRCN-BC and NSFC. Eur. J. Protistol. 61: 439–452
Dong J., Lu X. T., Shao C., Huang J., Al-Rasheid K. A. S. (2016) Morphology, morphogenesis and molecular phylogeny of a novel saline soil ciliate Lamtostyla salina n. sp. (Ciliophora, Hypotricha). Eur. J. Protistol. 56: 219–231
Eigner P. (1995) Divisional morphogenesis in Deviata abbrevescens, nov. gen. nov. spec, Neogeneia hortualis, nov. gen. nov. spec, and Kahliella simplex, (Horváth) Corliss and redefinition of the Kahliellidae (Ciliophora, Hypotrichida). Eur. J. Protistol.31: 341–366
Foissner W. (1982) Ökologie and Taxonomie der Hypotrichida (Protozoa: Ciliophora) einiger österreichischer Böden.Arch. Protistenk. 126: 19–143
Foissner W. (1987) Soil protozoa: fundamental problems, ecological significance, adaptations in ciliates and testaceans, bioindicators, and guide to the literature. Progr. Protistol.2: 69–212
Foissner W. (1998) An updated compilation of world soil ciliates (Protozoa, Ciliophora), with ecological notes, new records, and descriptions of new species. Eur. J. Protistol. 34: 195–235
Foissner W., Agatha S., Berger H. (2002) Soil ciliates (Protozoa, Ciliophora) from Namibia (Southwest Africa), with emphasis on two contrasting environments, the Etosha region and the Namib Desert. Part I. Text and line drawings.Part II: Photographs.Denisia 5: 1–1459
Gao F., Huang J., Zhao Y., Li L. F., Liu W., Miao M., Zhang Q., Li J., Yi Z., El-Serehy H. A., Warren A., Song W. B. (2017) Systematic studies on ciliates (Alveolata, Ciliophora): progress and achievements based on molecular information. Eur. J. Protistol. 61: 409–423
Gao F., Warren A., Zhang Q., Gong J., Miao M., Sun P., Xu D., Huang J., Yi Z., Song W. B. (2016) The all-data-based evolutionary hypothesis of ciliated protists with a revised classification of the phylum Ciliophora (Eukaryota, Alveolata). Sci. Rep.6: 24874
Hu X., Kusuoka Y. (2015) Two oxytrichids from the ancient Lake Biwa, Japan, with notes on morphogenesis of Notohymena australis (ciliophora, sporadotrichida). Acta Protozool. 54: 107–122
Huang J., Luo X. T., Bourland W. A., Gao F., Gao S. (2016) Multigene-based phylogeny of the ciliate families Amphisiellidae and Trachelostylidae (Protozoa: Ciliophora: Hypotrichia). Mol. Phylogenet. Evol.101: 101–110
Jankowski A. W. (2007) Phylum Ciliophora Doflein, 1901. In: Alimov, A. F. (ed.), Protista Part 2. Nauka, St. Petersburg, p. 415–993
Jerome C. A., Simon E. M., Lynn D. H. (1996) Description of Tetrahymena empidokyrea n. sp., a new species in the Tetrahymena pyriformis sibling species complex (Ciliophora, Oligohymenophorea), and an assessment of its phylogenetic position using small-subunit rRNA sequences. Can. J. Zool. 74:1898–1906
Li F., Lyu Z., Li Y., Fan X., Al-Farraj S. A., Shao C., Berger H. (2017) Morphology, morphogenesis, and molecular phylogeny of Uroleptus (Caudiholosticha) stueberi (Foissner, 1987) comb. nov. (Ciliophora, Hypotricha), and reclassification of the remaining Caudiholosticha species. Eur. J. Protistol.59: 82–98
Li F., Xing Y., Li J., Al-Rasheid K. A. S., He S., Chen S. (2013) Morphology, morphogenesis and small subunit rRNA gene sequence of a soil hypotrichous ciliate, Perisincirra paucicirrata (Ciliophora, Kahliellidae), from the shoreline of the Yellow River, north China. J. Eukaryot. Microbiol. 60: 247–256
Li J., Chen X. M., Xu K. (2016) Morphology and small subunit rDNA phylogeny of two new marine urostylid ciliates, Caudiholosticha marina sp. nov. andNothoholosticha flava sp. nov. (Ciliophora, Hypotrichia). J. Eukaryot. Microbiol. 63: 460–470
Liu W., Jiang J., Xu Y., Pan X., Qu Z, Luo X. T., Warren A., Ma H., Pan H. (2017) Great diversity in marine ciliates: fauna studies in China seas during the years 2011-2016. Eur. J. Protistol. 61: 424–438
Lu X.T., Huang J., Shao C., Al-Farraj S.A., Gao S. (2017) Morphology and morphogenesis of a novel saline soil hypotrichous ciliate, Gonostomum sinicum nov. spec. (Ciliophora, Hypotrichia, Gonostomatidae), including a report on the small subunit rDNA sequence. J. Eukaryot. Microbiol.64:632–646
Luo X. T., Fan Y., Hu X., Miao M., Al-Farraj S. A., Song W. B. (2016) Morphology, ontogeny, and molecular phylogeny of two freshwater species of Deviata (Ciliophora, Hypotrichia) from southern China. J. Eukaryot. Microbiol.63: 771–785
Luo X. T., Gao F., Yi Z., Pan Y., Al-Farraj S. A., Warren A. (2017a) Taxonomy and molecular phylogeny of two new brackish hypotrichous ciliates, with the establishment of a new genus (Protozoa, Ciliophora). Zool. J. Linn. Soc. 179: 475–491
Luo X. T., Li L. F., Wang C., Bourland W. A., Lin X., Hu X. (2017b) Morphologic and phylogenetic studies of two hypotrichous ciliates, with notes on morphogenesis in Gastrostyla steinii Engelmann, 1862 (Ciliophora, Hypotrichia). Eur. J. Protistol.60: 119–133
Lv Z., Chen L., Chen L. Y., Shao C., Miao M., Warren A. (2013) Morphogenesis and molecular phylogeny of a new freshwater ciliate, Notohymena apoaustralis n. sp. (Ciliophora, Oxytrichidae). J. Eukaryot. Microbiol. 60: 455–466
Lv Z., Shao C., Yi Z., Warren A. (2015) A molecular phylogenetic investigation of Bakuella, Anteholosticha, and Caudiholosticha (Protista, Ciliophora, Hypotrichia) based on three-gene sequences. J. Eukaryot. Microbiol.62: 391–399
Lynn D. H. (2008) The Ciliated Protozoa, Characterization, Classification, and Guide to the Literature, 3rd edn., 380–387. Springer, Dordrecht.
Lynn D. H., Small E. B. (2002) Phylum Ciliophora Doflein, 1901. In: Lee JJ, Leedale GG, Bradbury PC, eds. The illustrated guide to the protozoa, 2nd edn. Lawrence: Allen Press Inc, 371–656 (year 2000)
Medlin L., Elwood H. J., Stickel S., Sogin M. L. (1988) The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene 71: 491–499
Miller M. A., Pfeiffer W., Schwartz T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In Gateway Computing Environments Workshop (GCE), 14 Nov. New Orleans, LA: Institute of Electrical and Electronics Engineers, 1–8.
Nylander J. (2004) MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, 2.
Pan X., Bourland W. A., Song W. B. (2013) Protargol synthesis: an in-house protocol. J. Eukaryot. Microbiol. 60: 609–614
Pan X., Fan Y., Gao F., Qiu Z., Al-Farraj S. A., Warren A., Shao C. (2016) Morphology and systematics of two freshwater urostylid ciliates, with description of a new species (Protista, Ciliophora, Hypotrichia). Eur. J. Protistol. 52: 73–84
Paiva T. S., Borges B. N., Harada M. L., Silva-Neto I. D. (2009) Comparative phylogenetic study of Stichotrichia (Alveolata: Ciliophora: Spirotrichea) based on 18S-rDNA sequences. Genet. Mol. Res. 8: 223–246
Ronquist F., Huelsenbeck J. P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–1574
Shao C., Gao S., Hu X., Al-Rasheid K. A., Warren A. (2011) Ontogenesis and molecular phylogeny of a new marine urostylid ciliate, Anteholosticha petzi n. sp. (Ciliophora, Urostylida). J. Eukaryot. Microbiol. 58: 254–265
Shao C., Hu X., Warren A., Al-Rasheid K. A. S., Al-Quraishy S. A., Song W. B. (2007) Morphogenesis in the marine spirotrichous ciliate Apokeronopsis crassa (Claparède & Lachmann, 1858) n. comb. (Ciliophora: Stichotrichia), with the establishment of a new genus, Apokeronopsis n. g., and redefinition of the genus Thigmokeronopsis. J. Eukaryot. Microbiol.54: 392–401
Shao C., Li L. Q., Zhang Q., Song W. B., Berger H. (2014) Molecular phylogeny and ontogeny of a new ciliate genus, Paracladotricha salina n. g., n. sp. (Ciliophora, Hypotrichia). J. Eukaryot. Microbiol.61:371–380
Shao C., Lu X. T., Ma H. (2015) A general overview of the typical 18 frontal-ventral-transverse cirri Oxytrichidae s. l. genera (Ciliophora, Hypotrichia). J. Ocean. Univ. China.14: 1–15
Shao C., Pan X., Jiang J., Ma H., Al-Rasheid K. A. S., Warren A., Lin X. (2013) A redescription of the oxytrichid Tetmemena pustulata (Müller, 1786) Eigner, 1999 and notes on morphogenesis in the marine urostylid Metaurostylopsis salina Lei et al., 2005 (Ciliophora, Hypotrichia). Eur. J. Protistol. 49: 272–282
Shimodaira H. (2002) An approximately unbiased test of phylogenetic tree selection. Syst. Biol. 51:492–508
Shimodaira H., Hasegawa M. (2001) Consel: for assessing the confidence of phylogenetic tree selection. Bioinformatics 17: 1246–1247
Stamatakis A. (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312–1313
Swofford D. L. (2002) PAUP*: Phylogenetic analysis using parsimony (*and other methods). Version 4, Sunderland, MA
Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28: 2731–2739
Tuffrau M. (1979) Une nouvelle famille d’hypotriches, kahliellidae n. fam., et ses conséquences dans la répartition des stichotrichina. Trans. Amer. Micros. Soc.98: 521–528
Tuffrau M. (1987) Proposition d’une classification nouvelle de I’Ordre Hypotrichida (Protozoa, Ciliophora), fondée sur quelques données récentes. Ann. Sci. Nat. Zool.8: 111–117
Tuffrau M., Fleury A. (1994) Classe des Hypotrichea Stein, 1859. Traite. Zoologie. 2: 83–151
Wang J., Li L. F., Warren A., Shao C. (2017a) Morphogenesis and molecular phylogeny of the soil ciliate Rigidohymena quadrinucleata (Dragesco and Njine, 1971) Berger, 2011 (Ciliophora, Hypotricha, Oxytrichidae). Eur. J. Protistol.60: 1–12
Wang J., Lyu Z., Warren A., Wang F., Shao C. (2016) Morphology, ontogeny and molecular phylogeny of a novel saline soil ciliate, Urosomoida paragiliformis n. sp. (Ciliophora, Hypotrichia). Eur. J. Protistol.56: 79–89
Wang Y. Y., Chen X., Sheng Y., Liu Y., Gao S. (2017b) N6-adenine DNA methylation is associated with H2A.Z-containing well-positioned nucleosomes in Pol II-transcribed genes in Tetrahymena. Nuc. Acid Res.45:11594–11606
Wilbert N. (1975) Eine verbesserte technik der protargolimprägnationfürciliaten. Mikrokosmos 64:171–179
Yan Y., Fan Y., Chen X. R., Li L. F., Warren A., Al-Farraj S. A., Song W. B. (2016) Taxonomy and phylogeny of three heterotrich ciliates (Protozoa, Ciliophora), with description of a new Blepharismaspecies.Zool. J. Linn. Soc. 177: 320–334
Yan Y., Fan Y., Luo X. T., El-Serehy H. A., Bourland W. A., Chen X. R. (2018) New contribution to the species-rich genus Euplotes: morphology, ontogeny and systematic position of two species (Ciliophora; Euplotia). Eur. J. Protistol. 64: 20–39
Yi Z., Song W. B. (2011) Evolution of the order Urostylida (Protozoa, Ciliophora): new hypotheses based on multi-gene information and identification of localized incongruence. PLoS. One. 6: e17471
Zhao X. L., Wang Y. Y., Wang Y. R., Liu Y., Gao S. (2017) Tetrahymena histone methyltransferase TXR1 is required for both H3 and H3.3 lysine 27 methylation. Sci. Chin. Life Sci. 60: 264–270
Information: Acta Protozoologica, 2018, Volume 57, Issue 2, pp. 107 - 122
Article type: Original article
Laboratory of Microbiota, College of Life Science, Northwest Normal University, Lanzhou 730070, China
Laboratory of Microbiota, College of Life Science, Northwest Normal University, Lanzhou 730070, China
Laboratory of Protozoology, Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao 266003, China
Laboratory of Microbiota, College of Life Science, Northwest Normal University, Lanzhou 730070, China
Zoology Department, King Saud University, Riyadh, Saudi Arabia
School of Life Science, South China Normal University, Guangzhou 510631, China
Published at: 14.12.2018
Article status: Open
Licence: CC BY-NC-ND
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